Updated.
http://www.geocities.co.jp/SiliconValley-SanJose/5153/cygwin-package/doxygen-1.2.18-1-package.tgz
CHANGES:
compiled with -fno-exceptions and -fno-rtti.
> doxygen compiled with -fno-exceptions and -fno-rtti
> So I think adding these two options to the list of flags passed to g++
> would be useful.