Ok, I finally managed to reproduce locally and bisect the issue.
The commit which fixes the issue is the following:
commit e2cbcd9156d1606a9f2153aecd93a89fe6e29180
Author: H.J. Lu <hjl.tools@gmail.com>
Date: Mon Jun 6 11:06:55 2016 -0700
Support x86-64 TLS code sequences without PLT
Regards
Antoine.